ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7aajB2 - ECOD Domain | ECOD

ECOD/Domains/e7aajB2

e7aajB2

UID: 002698432

PDB

Range: B:218-357
PDB: 7AAJ chain B(all domains)
UniProt: P08397 (all domains)
Gene: HMBS

Molecule: Porphobilinogen deaminase

3D Structure

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Related Domains

Browse other domains in Porphobil_deamC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupPorphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain(330.4)

TT-groupPorphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain(330.4.1)

FFamilyPorphobil_deamC(330.4.1.1)

Ligands

in contact, ≤ 4 Å

Dipyrromethane CofactorDPM
drugDrugBank DB04517

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF03900Porphobil_deamC

Porphobilinogen deaminase, C-terminal domain

External Links

ECOD PDB View: 7AAJ RCSB PDB: 7AAJ PDBe: 7AAJ UniProt: P08397

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.