ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7b2rB1 - ECOD Domain | ECOD

ECOD/Domains/e7b2rB1

e7b2rB1

UID: 002700923

PDB

Range: B:468-740
PDB: 7B2R chain B(all domains)
UniProt: Q9C040 (all domains)
Gene: TRIM2

Molecule: Tripartite motif-containing protein 2

3D Structure

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Related Domains

Browse other domains in NHL, DUF5128 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyNHL, DUF5128(5.1.3.140)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NHL repeat

ClanCL0186Beta_propeller

PF17170DUF5128

6-bladed beta-propeller

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 7B2R RCSB PDB: 7B2R PDBe: 7B2R UniProt: Q9C040

Downloads

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