ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7b6iB2 - ECOD Domain | ECOD

ECOD/Domains/e7b6iB2

e7b6iB2

UID: 002701073

PDB

Range: B:105-338
PDB: 7B6I chain B(all domains)
UniProt: P22188 (all domains)
Gene: murE

Molecule: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase

3D Structure

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Related Domains

Browse other domains in Mur_ligase_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMur_ligase_M(2004.1.1.159)

Ligands

in contact, ≤ 4 Å

4-(3-fluoranylpyridin-2-yl)-1-methyl-piperazin-2-oneSZE

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08245Mur_ligase_M

Mur ligase middle domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7B6I RCSB PDB: 7B6I PDBe: 7B6I UniProt: P22188

Downloads

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