ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c6bC1 - ECOD Domain | ECOD

ECOD/Domains/e7c6bC1

e7c6bC1

UID: 002701713

PDB

Range: C:441-574
PDB: 7C6B chain C(all domains)
UniProt: Q9UKV8 (all domains)
Gene: AGO2

Molecule: Protein argonaute-2

3D Structure

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Related Domains

Browse other domains in Piwi,ArgoMid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi,ArgoMid(7590.1.1.3)

Ligands

in contact, ≤ 4 Å

3-[3-[9-[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]purin-6-yl]phenyl]propanoic acidK2R

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Piwi domain

ClanCL0219RNase_H

PF16487ArgoMid

Mid domain of argonaute

External Links

ECOD PDB View: 7C6B RCSB PDB: 7C6B PDBe: 7C6B UniProt: Q9UKV8

Downloads

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