ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7jvkD2 - ECOD Domain | ECOD

ECOD/Domains/e7jvkD2

e7jvkD2

UID: 002704764

PDB

Range: D:30-215,D:407-488
PDB: 7JVK chain D(all domains)
UniProt: E9QYP0 (all domains)
Gene: sidA

Molecule: L-ornithine N(5)-monooxygenase

3D Structure

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Related Domains

Browse other domains in Lys_Orn_oxgnase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyLys_Orn_oxgnase(2003.1.3.4)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF13434Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7JVK RCSB PDB: 7JVK PDBe: 7JVK UniProt: E9QYP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.