ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7k41A3 - ECOD Domain | ECOD

ECOD/Domains/e7k41A3

e7k41A3

UID: 002705301

PDB

Range: A:127-436
PDB: 7K41 chain A(all domains)
UniProt: Q89ZI2 (all domains)
Gene: BT_4395

Molecule: O-GlcNAcase BT_4395

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

4-(4-methylpiperidin-1-yl)-N-(2-phenylethyl)pyrimidin-2-amineVUA

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 7K41 RCSB PDB: 7K41 PDBe: 7K41 UniProt: Q89ZI2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.