ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7l4gA4 - ECOD Domain | ECOD

ECOD/Domains/e7l4gA4

e7l4gA4

UID: 002707828

PDB

Range: A:275-461
PDB: 7L4G chain A(all domains)
UniProt: J9VFT1 (all domains)
Gene: CNAG_00797

Molecule: Acetyl-coenzyme A synthetase

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate6R9

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 7L4G RCSB PDB: 7L4G PDBe: 7L4G UniProt: J9VFT1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.