ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7l6tA1 - ECOD Domain | ECOD

ECOD/Domains/e7l6tA1

e7l6tA1

UID: 002708360

PDB

Range: A:6798-7096
PDB: 7L6T chain A(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: 2'-O-methyltransferase

3D Structure

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Related Domains

Browse other domains in CoV_Methyltr_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCoV_Methyltr_2(2003.1.5.56)

Ligands

in contact, ≤ 4 Å

Beta-D-FructopyranoseBDF
drugDrugBank DB02561
S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Pfam Families

PF06460CoV_Methyltr_2

Coronavirus 2'-O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7L6T RCSB PDB: 7L6T PDBe: 7L6T UniProt: P0DTD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ion

alpha-D-glucopyranoseGLC

Magnesium ionMG

metal

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.