ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6l9zH1 - ECOD Domain | ECOD

ECOD/Domains/e6l9zH1

e6l9zH1

UID: 002708476

PDB

Range: H:30-125
PDB: 6L9Z chain H(all domains)
UniProt: P06899 (all domains)
Gene: H2BC11

Molecule: Histone H2B type 1-J

3D Structure

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Related Domains

Browse other domains in Histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupHistone(148.1.1)

FFamilyHistone(148.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Calcium ionCA
metalwithin 5 Å only
Potassium ionK

Pfam Families

PF00125Histone

Core histone H2A/H2B/H3/H4 domain

ClanCL0012Histone

External Links

ECOD PDB View: 6L9Z RCSB PDB: 6L9Z PDBe: 6L9Z UniProt: P06899

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.