ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ld9C2 - ECOD Domain | ECOD

ECOD/Domains/e6ld9C2

e6ld9C2

UID: 002708715

PDB

Range: C:256-396
PDB: 6LD9 chain C(all domains)
UniProt: Q5H1U9 (all domains)
Gene: metB

Molecule: Cystathionine gamma-synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyCys_Met_Meta_PP(3016.1.1.7)

Ligands

in contact, ≤ 4 Å

(2~{S})-4-[(2~{R})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]butanoic acidE9U

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6LD9 RCSB PDB: 6LD9 PDBe: 6LD9 UniProt: Q5H1U9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure