ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ldbC1 - ECOD Domain | ECOD

ECOD/Domains/e6ldbC1

e6ldbC1

UID: 002708724

PDB

Range: C:-1-198
PDB: 6LDB chain C(all domains)
UniProt: D2Q7B1 (all domains)
Gene: lacZ1

Molecule: LacZ1 Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyGlyco_hydro_2_N(10.32.1.9)

Ligands

in contact, ≤ 4 Å

(3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acidSJ5

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02837Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 6LDB RCSB PDB: 6LDB PDBe: 6LDB UniProt: D2Q7B1

Downloads

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