ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ldcA3 - ECOD Domain | ECOD

ECOD/Domains/e6ldcA3

e6ldcA3

UID: 002708732

PDB

Range: A:351-667
PDB: 6LDC chain A(all domains)
UniProt: D2Q7B1 (all domains)
Gene: lacZ1

Molecule: LacZ1 Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

(2~{S},3~{S},4~{R},5~{R})-2-nonyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acidE9O

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6LDC RCSB PDB: 6LDC PDBe: 6LDC UniProt: D2Q7B1

Downloads

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