ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lgyA1 - ECOD Domain | ECOD

ECOD/Domains/e6lgyA1

e6lgyA1

UID: 002708992

PDB

Range: A:-4-306
PDB: 6LGY chain A(all domains)
UniProt: A0A380PV03 (all domains)
Gene: CRN75_01595

Molecule: Transporter, sodium/bile acid symporter family

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupCation-proton antiporter(3236)

HH-groupCation-proton antiporter (CPA)(3236.1)

TT-groupCation-proton antiporter (CPA)(3236.1.1)

FFamilySBF(3236.1.1.2)

Ligands

in contact, ≤ 4 Å

Glyceryl 1-oleateA6L
drugDrugBank DB13171
GlycineGLY
drugDrugBank DB00145
Sodium ion

Pfam Families

Sodium Bile acid symporter family

ClanCL0064CPA_AT

External Links

ECOD PDB View: 6LGY RCSB PDB: 6LGY PDBe: 6LGY UniProt: A0A380PV03

Downloads

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metal

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.