ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lppB2 - ECOD Domain | ECOD

ECOD/Domains/e6lppB2

e6lppB2

UID: 002709369

PDB

Range: B:277-519
PDB: 6LPP chain B(all domains)
UniProt: Q8N465 (all domains)
Gene: D2HGDH

Molecule: D-2-hydroxyglutarate dehydrogenase, mitochondrial

3D Structure

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Related Domains

Browse other domains in FAD-oxidase_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyFAD-oxidase_C(304.6.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
(2R)-2-hydroxypentanedioic acid2HG
Zinc ionZN

Pfam Families

PF02913FAD-oxidase_C

FAD linked oxidases, C-terminal domain

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 6LPP RCSB PDB: 6LPP PDBe: 6LPP UniProt: Q8N465

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.