ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lxxA1 - ECOD Domain | ECOD

ECOD/Domains/e6lxxA1

e6lxxA1

UID: 002709781

PDB

Range: A:32-216
PDB: 6LXX chain A(all domains)
UniProt: F6VRB7 (all domains)
Gene: epdr1

Molecule: Ependymin-related 1

3D Structure

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Related Domains

Browse other domains in Ependymin →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipoprotein localization factors LolAB(71)

HH-groupLipoprotein localization factors LolAB(71.1)

TT-groupLipoprotein localization factors LolAB(71.1.1)

FFamilyEpendymin(71.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Iridium ionIR

Pfam Families

PF00811Ependymin

Ependymin

ClanCL0048LolA_LolB

External Links

ECOD PDB View: 6LXX RCSB PDB: 6LXX PDBe: 6LXX UniProt: F6VRB7

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.