ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lykA1 - ECOD Domain | ECOD

ECOD/Domains/e6lykA1

e6lykA1

UID: 002709788

PDB

Range: A:1034-1295
PDB: 6LYK chain A(all domains)
UniProt: P74881 (all domains)
Gene: purL

Molecule: Phosphoribosylformylglycinamidine synthase

3D Structure

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Related Domains

Browse other domains in GATase_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyGATase_5(2007.1.1.16)

Ligands

in contact, ≤ 4 Å

L-GlutamineGLN
drugDrugBank DB00130
Magnesium ionMG
metalwithin 5 Å only

+ 3 additives (1,2-ETHANEDIOL, Glycerol, Sulfate ion)

Pfam Families

PF13507GATase_5

CobB/CobQ-like glutamine amidotransferase domain

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 6LYK RCSB PDB: 6LYK PDBe: 6LYK UniProt: P74881

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

GlycerolGOL

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.