ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rlcD2 - ECOD Domain | ECOD

ECOD/Domains/e6rlcD2

e6rlcD2

UID: 002710681

PDB

Range: D:110-194
PDB: 6RLC chain D(all domains)
UniProt: O00560 (all domains)
Gene: SDCBP

Molecule: Syntenin-1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 6RLC RCSB PDB: 6RLC PDBe: 6RLC UniProt: O00560

Downloads

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