ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5rw0A1 - ECOD Domain | ECOD

ECOD/Domains/e5rw0A1

e5rw0A1

UID: 002710966

PDB

Range: A:476-749
PDB: 5RW0 chain A(all domains)
UniProt: Q96HY7 (all domains)
Gene: DHTKD1

Molecule: Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Thiamine diphosphateTPP
1-{(2S,4S)-4-fluoro-1-[(2-methyl-1,3-thiazol-4-yl)methyl]pyrrolidin-2-yl}methanamineWGD

Shown in the structure viewer.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 5RW0 RCSB PDB: 5RW0 PDBe: 5RW0 UniProt: Q96HY7

Downloads

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Drug annotations from DrugDomain.