ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ryxA2 - ECOD Domain | ECOD

ECOD/Domains/e5ryxA2

e5ryxA2

UID: 002711195

PDB

Range: A:107-190
PDB: 5RYX chain A(all domains)
UniProt: Q9Y2J2 (all domains)
Gene: EPB41L3

Molecule: Isoform 2 of Band 4.1-like protein 3

3D Structure

Loading viewer...

Related Domains

Browse other domains in FERM_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFERM_N(221.1.1.36)

Ligands

in contact, ≤ 4 Å

N-(2-methoxy-5-methylphenyl)-N'-4H-1,2,4-triazol-4-ylureaVZS

+ 2 additives (Dimethyl sulfoxide, 1,2-ETHANEDIOL)

Dimethyl sulfoxideDMS
1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

FERM N-terminal domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5RYX RCSB PDB: 5RYX PDBe: 5RYX UniProt: Q9Y2J2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.