ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s8qB1 - ECOD Domain | ECOD

ECOD/Domains/e5s8qB1

e5s8qB1

UID: 002711576

PDB

Range: B:1314-1432
PDB: 5S8Q chain B(all domains)
UniProt: Q8WWQ0 (all domains)
Gene: PHIP

Molecule: PH-interacting protein

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

(3R)-3-methyl-1,2,3,4-tetrahydro-5H-1,4-benzodiazepin-5-oneXLY
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5S8Q RCSB PDB: 5S8Q PDBe: 5S8Q UniProt: Q8WWQ0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.