ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6snlD2 - ECOD Domain | ECOD

ECOD/Domains/e6snlD2

e6snlD2

UID: 002711632

PDB

Range: D:147-321
PDB: 6SNL chain D(all domains)
UniProt: A0A0D1XFW6 (all domains)
Gene: PV11_02554

Molecule: amine transaminase

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045)

HH-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1)

TT-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1.1)

FFamilyAminotran_4(4045.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 6SNL RCSB PDB: 6SNL PDBe: 6SNL UniProt: A0A0D1XFW6

Downloads

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Drug annotations from DrugDomain.