ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tflC1 - ECOD Domain | ECOD

ECOD/Domains/e6tflC1

e6tflC1

UID: 002711975

PDB

Range: C:-1-60
PDB: 6TFL chain C(all domains)
UniProt: B0R5R2 (all domains)
Gene: lsm

Molecule: RNA-binding protein Lsm

3D Structure

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Related Domains

Browse other domains in LSM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyLSM(4.1.1.19)

Ligands

in contact, ≤ 4 Å

UridineURI
drugDrugBank DB02745
Calcium ionCA
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LSM domain

ClanCL0986Sm-like

External Links

ECOD PDB View: 6TFL RCSB PDB: 6TFL PDBe: 6TFL UniProt: B0R5R2

Downloads

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