ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6thd11 - ECOD Domain | ECOD

ECOD/Domains/e6thd11

e6thd11

UID: 002712009

PDB

Range: 1:4-281
PDB: 6THD chain 1(all domains)
UniProt: P12915 (all domains)

Molecule: Genome polyprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv_5(10.2.1.69)

Ligands

in contact, ≤ 4 Å

Myristic acidMYR
drugDrugBank DB08231

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Picornavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6THD RCSB PDB: 6THD PDBe: 6THD UniProt: P12915

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.