ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tiiAAA4 - ECOD Domain | ECOD

ECOD/Domains/e6tiiAAA4

e6tiiAAA4

UID: 002712028

PDB

Range: AAA:61-85,AAA:163-254
PDB: 6TII chain AAA(all domains)
UniProt: A0A5P8YJF3 (all domains)

Molecule: Peptidoglycan D,D-transpeptidase MrdA

3D Structure

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Related Domains

Browse other domains in PBP_dimer →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer(3702.1.1.1)

Ligands

in contact, ≤ 4 Å

Bromide ionBR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03717PBP_dimer

Penicillin-binding Protein dimerisation domain

ClanCL0776PBP_NTD

External Links

ECOD PDB View: 6TII RCSB PDB: 6TII PDBe: 6TII UniProt: A0A5P8YJF3

Downloads

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