ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6v9aF1 - ECOD Domain | ECOD

ECOD/Domains/e6v9aF1

e6v9aF1

UID: 002713137

PDB

Range: F:304-420
PDB: 6V9A chain F(all domains)
UniProt: Q8U8L5 (all domains)
Gene: glgC

Molecule: Glucose-1-phosphate adenylyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep_GlmU →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep_GlmU(208.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24894Hexapep_GlmU

GlmU-like, C-terminal hexapeptide

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 6V9A RCSB PDB: 6V9A PDBe: 6V9A UniProt: Q8U8L5

Downloads

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