ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ve1C1 - ECOD Domain | ECOD

ECOD/Domains/e6ve1C1

e6ve1C1

UID: 002713316

PDB

Range: C:7-274
PDB: 6VE1 chain C(all domains)
UniProt: P04067 (all domains)

Molecule: Endo-beta-N-acetylglucosaminidase H

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_18 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_18(2002.1.1.30)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00704Glyco_hydro_18

Glycosyl hydrolases family 18

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6VE1 RCSB PDB: 6VE1 PDBe: 6VE1 UniProt: P04067

Downloads

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