ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vjrB2 - ECOD Domain | ECOD

ECOD/Domains/e6vjrB2

e6vjrB2

UID: 002713575

PDB

Range: B:278-483
PDB: 6VJR chain B(all domains)
UniProt: A9A1Y2 (all domains)
Gene: Nmar_0207

Molecule: Vinylacetyl-CoA Delta-isomerase

3D Structure

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Related Domains

Browse other domains in HpaB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6)

TT-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6.1)

FFamilyHpaB(633.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
FE (III) IONFE
metal
Iron/sulfur cluster

Pfam Families

4-hydroxyphenylacetate 3-hydroxylase C terminal

ClanCL0087Acyl-CoA_dh

External Links

ECOD PDB View: 6VJR RCSB PDB: 6VJR PDBe: 6VJR UniProt: A9A1Y2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.