ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vyaX1 - ECOD Domain | ECOD

ECOD/Domains/e6vyaX1

e6vyaX1

UID: 002714128

PDB

Range: X:32-327,X:349-448
PDB: 6VYA chain X(all domains)
UniProt: E0Y3X1 (all domains)
Gene: notF

Molecule: Deoxybrevianamide E synthase notF

3D Structure

Loading viewer...

Related Domains

Browse other domains in Trp_DMAT →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyTrp_DMAT(4194.1.1.2)

Ligands

in contact, ≤ 4 Å

Dimethylallyl S-ThiolodiphosphateDST
drugDrugBank DB02270
(3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dioneQRP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11991Trp_DMAT

Tryptophan dimethylallyltransferase

External Links

ECOD PDB View: 6VYA RCSB PDB: 6VYA PDBe: 6VYA UniProt: E0Y3X1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure