ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wlw52 - ECOD Domain | ECOD

ECOD/Domains/e6wlw52

e6wlw52

UID: 002714732

PDB

Range: 5:6-83
PDB: 6WLW chain 5(all domains)
UniProt: P27449 (all domains)
Gene: ATP6V0C

Molecule: V-type proton ATPase 16 kDa proteolipid subunit

3D Structure

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Related Domains

Browse other domains in ATP-synt_C →

Classification

AArchitectureextended segments(a.20)

XX-groupF1F0 ATP synthase subunit C(5041)

HH-groupF1F0 ATP synthase subunit C(5041.1)

TT-groupF1F0 ATP synthase subunit C(5041.1.1)

FFamilyATP-synt_C(5041.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540within 5 Å only
PhosphatidylethanolaminePTY
tri(methyl)-[2-[[(2~{R})-2-[(~{Z})-octadec-9-enoyl]oxy-3-[(~{E})-1-oxidanylideneoctadec-9-enoxy]propoxy]-oxidanyl-phosphoryl]oxyethyl]azanium

Pfam Families

PF00137ATP-synt_C

ATP synthase subunit C

External Links

ECOD PDB View: 6WLW RCSB PDB: 6WLW PDBe: 6WLW UniProt: P27449

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.