ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wm222 - ECOD Domain | ECOD

ECOD/Domains/e6wm222

e6wm222

UID: 002714816

PDB

Range: 2:6-83
PDB: 6WM2 chain 2(all domains)
UniProt: P27449 (all domains)
Gene: ATP6V0C

Molecule: V-type proton ATPase 16 kDa proteolipid subunit

3D Structure

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Related Domains

Browse other domains in ATP-synt_C →

Classification

AArchitectureextended segments(a.20)

XX-groupF1F0 ATP synthase subunit C(5041)

HH-groupF1F0 ATP synthase subunit C(5041.1)

TT-groupF1F0 ATP synthase subunit C(5041.1.1)

FFamilyATP-synt_C(5041.1.1.1)

Ligands

in contact, ≤ 4 Å

PhosphatidylethanolaminePTY
tri(methyl)-[2-[[(2~{R})-2-[(~{Z})-octadec-9-enoyl]oxy-3-[(~{E})-1-oxidanylideneoctadec-9-enoxy]propoxy]-oxidanyl-phosphoryl]oxyethyl]azaniumWSS
(2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acidWJS

Pfam Families

PF00137ATP-synt_C

ATP synthase subunit C

External Links

ECOD PDB View: 6WM2 RCSB PDB: 6WM2 PDBe: 6WM2 UniProt: P27449

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.