ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xncB2 - ECOD Domain | ECOD

ECOD/Domains/e6xncB2

e6xncB2

UID: 002717260

PDB

Range: B:201-397
PDB: 6XNC chain B(all domains)
UniProt: P0A2K1 (all domains)
Gene: trpB

Molecule: Tryptophan synthase beta chain

3D Structure

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Related Domains

Browse other domains in PALP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4)

TT-groupTryptophan synthase beta subunit-like PLP-dependent enzymes(2003.4.1)

FFamilyPALP(2003.4.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
TryptophanTRP
drugDrugBank DB00150
Sodium ion

Pfam Families

Pyridoxal-phosphate dependent enzyme

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6XNC RCSB PDB: 6XNC PDBe: 6XNC UniProt: P0A2K1

Downloads

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metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.