ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xt1C2 - ECOD Domain | ECOD

ECOD/Domains/e6xt1C2

e6xt1C2

UID: 002717432

PDB

Range: C:615-907
PDB: 6XT1 chain C(all domains)
UniProt: F8UNJ8 (all domains)
Gene: CP4_3468

Molecule: ZmpC Glycopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M60 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M60(2498.1.1.41)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13402Peptidase_M60

Peptidase M60, enhancin and enhancin-like

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6XT1 RCSB PDB: 6XT1 PDBe: 6XT1 UniProt: F8UNJ8

Downloads

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