ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xu0A1 - ECOD Domain | ECOD

ECOD/Domains/e6xu0A1

e6xu0A1

UID: 002717465

PDB

Range: A:172-427
PDB: 6XU0 chain A(all domains)
UniProt: O28951 (all domains)
Gene: AF_1318

Molecule: Piwi protein

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPiwi(2484.1.1.26)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Magnesium ionMG
metal
2-(2-METHOXYETHOXY)ETHANOL

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6XU0 RCSB PDB: 6XU0 PDBe: 6XU0 UniProt: O28951

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, Cacodylate ion)

GlycerinGOL
DrugBank DB09462
Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.