ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xu0B2 - ECOD Domain | ECOD

ECOD/Domains/e6xu0B2

e6xu0B2

UID: 002717468

PDB

Range: B:10-172
PDB: 6XU0 chain B(all domains)
UniProt: O28951 (all domains)
Gene: AF_1318

Molecule: Piwi protein

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi(7590.1.1.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Magnesium ionMG
metal

+ 2 additives (Glycerin, Cacodylate ion)

Glycerin

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6XU0 RCSB PDB: 6XU0 PDBe: 6XU0 UniProt: O28951

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.