ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y3dDDD1 - ECOD Domain | ECOD

ECOD/Domains/e6y3dDDD1

e6y3dDDD1

UID: 002717807

PDB

Range: DDD:1-172
PDB: 6Y3D chain DDD(all domains)
UniProt: O19909 (all domains)
Gene: cpcB

Molecule: C-phycocyanin beta chain

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

PhycocyanobilinCYC

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 6Y3D RCSB PDB: 6Y3D PDBe: 6Y3D UniProt: O19909

Downloads

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