ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y8zA3 - ECOD Domain | ECOD

ECOD/Domains/e6y8zA3

e6y8zA3

UID: 002717933

PDB

Range: A:309-425
PDB: 6Y8Z chain A(all domains)
UniProt: A0A6P3VN15 (all domains)
Gene: pgm5

Molecule: Phosphoglucomutase 5

3D Structure

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Related Domains

Browse other domains in PGM_PMM_III →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphoglucomutase, first 3 domains(7528)

HH-groupPhosphoglucomutase, first 3 domains(7528.1)

TT-groupPhosphoglucomutase, first 3 domains(7528.1.1)

FFamilyPGM_PMM_III(7528.1.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
NICKEL (II) IONNI
metalwithin 5 Å only

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF02880PGM_PMM_III

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III

ClanCL0754PGM_I-III

External Links

ECOD PDB View: 6Y8Z RCSB PDB: 6Y8Z PDBe: 6Y8Z UniProt: A0A6P3VN15

Downloads

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Drug annotations from DrugDomain.