ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y9dL3 - ECOD Domain | ECOD

ECOD/Domains/e6y9dL3

e6y9dL3

UID: 002717970

PDB

Range: L:158-371
PDB: 6Y9D chain L(all domains)
UniProt: A0A059ZPP5 (all domains)

Molecule: Carnitine monooxygenase oxygenase subunit

3D Structure

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Related Domains

Browse other domains in Ring_hydroxyl_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyRing_hydroxyl_A(331.3.1.2)

Ligands

in contact, ≤ 4 Å

(3-Carboxy-2-(R)-Hydroxy-Propyl)-Trimethyl-Ammonium152
drugDrugBank DB02648
FE (III) IONFE
metal
Thiocyanate ion

Pfam Families

PF00848Ring_hydroxyl_A

Ring hydroxylating alpha subunit (catalytic domain)

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6Y9D RCSB PDB: 6Y9D PDBe: 6Y9D UniProt: A0A059ZPP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.