ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yirA1 - ECOD Domain | ECOD

ECOD/Domains/e6yirA1

e6yirA1

UID: 002718212

PDB

Range: A:295-367
PDB: 6YIR chain A(all domains)
UniProt: P94360 (all domains)
Gene: msmX

Molecule: Oligosaccharides import ATP-binding protein MsmX

3D Structure

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Related Domains

Browse other domains in TOBE →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupMOP-like(2.4)

TT-groupMOP-like(2.4.1)

FFamilyTOBE(2.4.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TOBE domain

ClanCL0021OB

External Links

ECOD PDB View: 6YIR RCSB PDB: 6YIR PDBe: 6YIR UniProt: P94360

Downloads

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