ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yk9A1 - ECOD Domain | ECOD

ECOD/Domains/e6yk9A1

e6yk9A1

UID: 002718222

PDB

Range: A:243-342
PDB: 6YK9 chain A(all domains)

Molecule: 5,10-methenyltetrahydromethanopterin hydrogenase

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-group6-phosphogluconate dehydrogenase C-terminal domain-like(129)

HH-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1)

TT-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1.1)

FFamilyHMD(129.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase

ClanCL01066PGD_C

External Links

ECOD PDB View: 6YK9 RCSB PDB: 6YK9 PDBe: 6YK9

Downloads

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