ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yp7w1 - ECOD Domain | ECOD

ECOD/Domains/e6yp7w1

e6yp7w1

UID: 002718518

PDB

Range: w:1-54
PDB: 6YP7 chain w(all domains)
UniProt: A0A2D0TCJ2 (all domains)

Molecule: Photosystem II reaction center protein W

3D Structure

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Related Domains

Browse other domains in PsbW →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center W protein, chloroplastic(1084)

HH-groupPhotosystem II reaction center W protein, chloroplastic(1084.1)

TT-groupPhotosystem II reaction center W protein, chloroplastic(1084.1.1)

FFamilyPsbW(1084.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLELHG
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Pfam Families

Photosystem II reaction centre W protein (PsbW)

External Links

ECOD PDB View: 6YP7 RCSB PDB: 6YP7 PDBe: 6YP7 UniProt: A0A2D0TCJ2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.