ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zdfB1 - ECOD Domain | ECOD

ECOD/Domains/e6zdfB1

e6zdfB1

UID: 002719536

PDB

Range: B:98-454
PDB: 6ZDF chain B(all domains)
UniProt: Q5SRI9 (all domains)
Gene: MANEA

Molecule: Glycoprotein endo-alpha-1,2-mannosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_99 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_99(2002.1.1.185)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16317Glyco_hydro_99

Glycosyl hydrolase family 99

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6ZDF RCSB PDB: 6ZDF PDBe: 6ZDF UniProt: Q5SRI9

Downloads

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