ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zfkA1 - ECOD Domain | ECOD

ECOD/Domains/e6zfkA1

e6zfkA1

UID: 002719566

PDB

Range: A:16-245
PDB: 6ZFK chain A(all domains)
UniProt: P00760 (all domains)
Gene: PRSS1

Molecule: Cationic trypsin

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

4-oxo-N-[(1S)-1-(pyridin-3-yl)ethyl]-4-(thiophen-2-yl)butanamide479
Calcium ionCA
metal

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxide

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6ZFK RCSB PDB: 6ZFK PDBe: 6ZFK UniProt: P00760

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.