ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zgpB3 - ECOD Domain | ECOD

ECOD/Domains/e6zgpB3

e6zgpB3

UID: 002719648

PDB

Range: B:158-371
PDB: 6ZGP chain B(all domains)
UniProt: A0A059ZPP5 (all domains)

Molecule: Carnitine monooxygenase oxygenase subunit

3D Structure

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Related Domains

Browse other domains in Ring_hydroxyl_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyRing_hydroxyl_A(331.3.1.2)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
~{N}-(3-imidazol-1-ylpropyl)-8-(4-methoxyphenyl)-1,6-naphthyridine-2-carboxamideQKQ

+ 1 additive (HEPES)

HEPES

Pfam Families

PF00848Ring_hydroxyl_A

Ring hydroxylating alpha subunit (catalytic domain)

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6ZGP RCSB PDB: 6ZGP PDBe: 6ZGP UniProt: A0A059ZPP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.