ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zj5AAA1 - ECOD Domain | ECOD

ECOD/Domains/e6zj5AAA1

e6zj5AAA1

UID: 002719764

PDB

Range: AAA:99-460
PDB: 6ZJ5 chain AAA(all domains)
UniProt: Q5SRI9 (all domains)
Gene: MANEA

Molecule: Glycoprotein endo-alpha-1,2-mannosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_99 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_99(2002.1.1.185)

Ligands

in contact, ≤ 4 Å

1-deoxymannojirimycinDMJ
drugDrugBank DB03955
alpha-D-glucopyranoseGLC
6-tungstotellurate(VI)TEW

Pfam Families

PF16317Glyco_hydro_99

Glycosyl hydrolase family 99

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6ZJ5 RCSB PDB: 6ZJ5 PDBe: 6ZJ5 UniProt: Q5SRI9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.