ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zpdA1 - ECOD Domain | ECOD

ECOD/Domains/e6zpdA1

e6zpdA1

UID: 002720232

PDB

Range: A:48-90
PDB: 6ZPD chain A(all domains)
UniProt: P49638 (all domains)
Gene: TTPA

Molecule: Alpha-tocopherol transfer protein

3D Structure

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Related Domains

Browse other domains in CRAL_TRIO_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyCRAL_TRIO_N(103.1.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Tromethamine, Sulfate ion)

TromethamineTRS
DrugBank DB03754
Sulfate ionSO4

Pfam Families

PF03765CRAL_TRIO_N

CRAL/TRIO, N-terminal domain

ClanCL0214UBA

External Links

ECOD PDB View: 6ZPD RCSB PDB: 6ZPD PDBe: 6ZPD UniProt: P49638

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.