ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zt9A2 - ECOD Domain | ECOD

ECOD/Domains/e6zt9A2

e6zt9A2

UID: 002720385

PDB

Range: A:13-376
PDB: 6ZT9 chain A(all domains)
UniProt: O69262 (all domains)
Gene: AbjA

Molecule: Alpha-L-arabinofuranosidase

3D Structure

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Related Domains

Browse other domains in Alpha-L-arabinofuranosidase C-terminal domain / Alpha-L-arabinofuranosidase 1 domain →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-L-arabinofuranosidase C-terminal domain / Alpha-L-arabinofuranosidase 1 domain(2002.1.1.146)

Ligands

in contact, ≤ 4 Å

Alpha-L-ArabinoseAHR
drugDrugBank DB03142

+ 3 additives (Acetate, (4r)-2-Methylpentane-2,4-Diol, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

AcetateACT
DrugBank DB14511

Pfam Families

PF06964Alpha-L-AF_C

Alpha-L-arabinofuranosidase C-terminal domain

ClanCL0369GHD

PF22848ASD1_dom

Alpha-L-arabinofuranosidase 1 domain

ClanCL0369GHD

External Links

ECOD PDB View: 6ZT9 RCSB PDB: 6ZT9 PDBe: 6ZT9 UniProt: O69262

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer. Drug annotations from DrugDomain.