ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zzzA1 - ECOD Domain | ECOD

ECOD/Domains/e6zzzA1

e6zzzA1

UID: 002720838

RepresentativePDB

Range: A:18-144
PDB: 6ZZZ chain A(all domains)
UniProt: P21825 (all domains)
Gene: SEC62

Molecule: Translocation protein SEC62

3D Structure

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Related Domains

Browse other domains in Sec62 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySec62(101.1.2.51)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Translocation protein Sec62

External Links

ECOD PDB View: 6ZZZ RCSB PDB: 6ZZZ PDBe: 6ZZZ UniProt: P21825

Downloads

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