ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7bwtA2 - ECOD Domain | ECOD

ECOD/Domains/e7bwtA2

e7bwtA2

UID: 002721208

PDB

Range: A:30-133
PDB: 7BWT chain A(all domains)
UniProt: P40722 (all domains)
Gene: sopD

Molecule: SPI-1 type III secretion system effector SopD

3D Structure

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Related Domains

Browse other domains in SopD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupType III secretory system chaperone-like(241)

HH-groupN-terminal domain of secreted effector protein sifA(241.13)

TT-groupN-terminal domain of secreted effector protein sifA(241.13.1)

FFamilySopD(241.13.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Salmonella outer protein D

External Links

ECOD PDB View: 7BWT RCSB PDB: 7BWT PDBe: 7BWT UniProt: P40722

Downloads

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