ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7cn8A1 - ECOD Domain | ECOD

ECOD/Domains/e7cn8A1

e7cn8A1

UID: 002721469

PDB

Range: A:327-527
PDB: 7CN8 chain A(all domains)
UniProt: A0A6G6A2Q2 (all domains)

Molecule: Glycoprotein

3D Structure

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Related Domains

Browse other domains in bCoV_S1_RBD →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCoronavirus spike protein receptor-binding domain(4169)

HH-groupCoronavirus spike protein receptor-binding domain(4169.1)

TT-groupBeta-coronavirus spike protein receptor-binding domain(4169.1.1)

FFamilybCoV_S1_RBD(4169.1.1.1)

Ligands

in contact, ≤ 4 Å

Linoleic acidEIC
drugDrugBank DB14104
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

PF09408bCoV_S1_RBD

Betacoronavirus spike glycoprotein S1, receptor binding

External Links

ECOD PDB View: 7CN8 RCSB PDB: 7CN8 PDBe: 7CN8 UniProt: A0A6G6A2Q2

Downloads

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Drug annotations from DrugDomain.