ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7lhxA1 - ECOD Domain | ECOD

ECOD/Domains/e7lhxA1

e7lhxA1

UID: 002722365

PDB

Range: A:3-98
PDB: 7LHX chain A(all domains)
UniProt: P09012 (all domains)
Gene: SNRPA

Molecule: U1 small nuclear ribonucleoprotein A

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 7LHX RCSB PDB: 7LHX PDBe: 7LHX UniProt: P09012

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.